Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Gli1P47806 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Gli1P47806 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gli1P47806 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli1P47806 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Gli1P47806 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.73■□□□□ 0.59
Gli1P47806 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.73■□□□□ 0.59
Gli1P47806 Gm9870-201ENSMUST00000063874 645 ntBASIC18.73■□□□□ 0.59
Gli1P47806 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli1P47806 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli1P47806 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli1P47806 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.72■□□□□ 0.59
Gli1P47806 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gli1P47806 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.72■□□□□ 0.59
Gli1P47806 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli1P47806 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.72■□□□□ 0.59
Gli1P47806 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli1P47806 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gli1P47806 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli1P47806 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gli1P47806 Mir7075-201ENSMUST00000184187 82 ntBASIC18.71■□□□□ 0.59
Gli1P47806 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli1P47806 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gli1P47806 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.71■□□□□ 0.59
Gli1P47806 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gli1P47806 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.71■□□□□ 0.58
Gli1P47806 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Gli1P47806 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Gli1P47806 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Gli1P47806 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli1P47806 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli1P47806 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.7■□□□□ 0.58
Gli1P47806 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli1P47806 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.7■□□□□ 0.58
Gli1P47806 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gli1P47806 Gm43017-201ENSMUST00000198296 752 ntBASIC18.7■□□□□ 0.58
Gli1P47806 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.7■□□□□ 0.58
Gli1P47806 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.7■□□□□ 0.58
Gli1P47806 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli1P47806 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gli1P47806 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Gli1P47806 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gli1P47806 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gli1P47806 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Gli1P47806 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli1P47806 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Gli1P47806 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Mir6236-201ENSMUST00000184437 123 ntBASIC18.68■□□□□ 0.58
Gli1P47806 Gm29257-201ENSMUST00000186115 639 ntBASIC18.68■□□□□ 0.58
Gli1P47806 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli1P47806 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli1P47806 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gli1P47806 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli1P47806 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli1P47806 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.67■□□□□ 0.58
Gli1P47806 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Gli1P47806 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Gli1P47806 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gli1P47806 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gli1P47806 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
Gli1P47806 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.66■□□□□ 0.58
Gli1P47806 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.66■□□□□ 0.58
Gli1P47806 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.66■□□□□ 0.58
Gli1P47806 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gli1P47806 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.66■□□□□ 0.58
Gli1P47806 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms