Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm27801-201ENSMUST00000184174 223 ntBASIC18.44■□□□□ 0.54
Cdh4P39038 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cdh4P39038 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Cdh4P39038 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdh4P39038 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.43■□□□□ 0.54
Cdh4P39038 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdh4P39038 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdh4P39038 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh4P39038 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdh4P39038 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Cdh4P39038 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Cdh4P39038 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdh4P39038 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.42■□□□□ 0.54
Cdh4P39038 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdh4P39038 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdh4P39038 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdh4P39038 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh4P39038 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdh4P39038 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh4P39038 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh4P39038 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh4P39038 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cdh4P39038 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdh4P39038 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdh4P39038 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdh4P39038 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh4P39038 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdh4P39038 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdh4P39038 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdh4P39038 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh4P39038 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh4P39038 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh4P39038 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh4P39038 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdh4P39038 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdh4P39038 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.38■□□□□ 0.53
Cdh4P39038 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh4P39038 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh4P39038 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdh4P39038 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdh4P39038 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Iqck-206ENSMUST00000208658 2891 ntBASIC18.37■□□□□ 0.53
Cdh4P39038 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh4P39038 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdh4P39038 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdh4P39038 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.36■□□□□ 0.53
Cdh4P39038 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh4P39038 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdh4P39038 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdh4P39038 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh4P39038 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh4P39038 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh4P39038 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdh4P39038 Gm10493-201ENSMUST00000097270 612 ntBASIC18.36■□□□□ 0.53
Cdh4P39038 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Cdh4P39038 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh4P39038 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh4P39038 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh4P39038 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdh4P39038 Gm18284-201ENSMUST00000172604 624 ntBASIC18.35■□□□□ 0.53
Cdh4P39038 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms