Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LdlrP35951 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LdlrP35951 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LdlrP35951 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.14■□□□□ 0.65
LdlrP35951 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LdlrP35951 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LdlrP35951 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.14■□□□□ 0.65
LdlrP35951 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LdlrP35951 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.13■□□□□ 0.65
LdlrP35951 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LdlrP35951 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LdlrP35951 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LdlrP35951 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LdlrP35951 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.12■□□□□ 0.65
LdlrP35951 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
LdlrP35951 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LdlrP35951 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LdlrP35951 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.11■□□□□ 0.65
LdlrP35951 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
LdlrP35951 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Gm6139-201ENSMUST00000079261 882 ntBASIC19.11■□□□□ 0.65
LdlrP35951 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
LdlrP35951 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LdlrP35951 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.1■□□□□ 0.65
LdlrP35951 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.1■□□□□ 0.65
LdlrP35951 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LdlrP35951 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 AA386476-201ENSMUST00000098781 1665 ntBASIC19.1■□□□□ 0.65
LdlrP35951 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LdlrP35951 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LdlrP35951 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.09■□□□□ 0.65
LdlrP35951 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.09■□□□□ 0.65
LdlrP35951 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LdlrP35951 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.09■□□□□ 0.65
LdlrP35951 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LdlrP35951 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LdlrP35951 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LdlrP35951 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LdlrP35951 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LdlrP35951 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LdlrP35951 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LdlrP35951 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LdlrP35951 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.08■□□□□ 0.64
LdlrP35951 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LdlrP35951 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.08■□□□□ 0.64
LdlrP35951 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LdlrP35951 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms