Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc6a1P31648 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc6a1P31648 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc6a1P31648 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc6a1P31648 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc6a1P31648 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Slc6a1P31648 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a1P31648 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a1P31648 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a1P31648 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a1P31648 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Slc6a1P31648 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.52■□□□□ 0.24
Slc6a1P31648 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a1P31648 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a1P31648 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a1P31648 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a1P31648 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.51■□□□□ 0.23
Slc6a1P31648 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a1P31648 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a1P31648 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a1P31648 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a1P31648 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Slc6a1P31648 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a1P31648 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.5■□□□□ 0.23
Slc6a1P31648 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a1P31648 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.5■□□□□ 0.23
Slc6a1P31648 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.5■□□□□ 0.23
Slc6a1P31648 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Gm9959-201ENSMUST00000068277 390 ntBASIC16.5■□□□□ 0.23
Slc6a1P31648 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.5■□□□□ 0.23
Slc6a1P31648 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a1P31648 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a1P31648 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a1P31648 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a1P31648 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Etf1-202ENSMUST00000180351 108 ntBASIC16.49■□□□□ 0.23
Slc6a1P31648 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.49■□□□□ 0.23
Slc6a1P31648 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.49■□□□□ 0.23
Slc6a1P31648 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc6a1P31648 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms