Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Pde6bP23440 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pde6bP23440 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6bP23440 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Pde6bP23440 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pde6bP23440 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6bP23440 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.94■□□□□ 0.94
Pde6bP23440 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.94■□□□□ 0.94
Pde6bP23440 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pde6bP23440 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6bP23440 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.93■□□□□ 0.94
Pde6bP23440 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6bP23440 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pde6bP23440 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.93■□□□□ 0.94
Pde6bP23440 Mir5133-201ENSMUST00000174955 77 ntBASIC20.93■□□□□ 0.94
Pde6bP23440 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pde6bP23440 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6bP23440 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6bP23440 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.92■□□□□ 0.94
Pde6bP23440 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Pde6bP23440 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.92■□□□□ 0.94
Pde6bP23440 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.92■□□□□ 0.94
Pde6bP23440 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6bP23440 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pde6bP23440 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6bP23440 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Pde6bP23440 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6bP23440 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6bP23440 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pde6bP23440 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6bP23440 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Pde6bP23440 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6bP23440 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pde6bP23440 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6bP23440 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6bP23440 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pde6bP23440 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.89■□□□□ 0.93
Pde6bP23440 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.89■□□□□ 0.93
Pde6bP23440 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.89■□□□□ 0.93
Pde6bP23440 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.89■□□□□ 0.93
Pde6bP23440 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6bP23440 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6bP23440 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Pde6bP23440 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.88■□□□□ 0.93
Pde6bP23440 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6bP23440 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6bP23440 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6bP23440 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.87■□□□□ 0.93
Pde6bP23440 Gm13146-201ENSMUST00000118508 780 ntBASIC20.87■□□□□ 0.93
Pde6bP23440 Gm12441-201ENSMUST00000121806 588 ntBASIC20.87■□□□□ 0.93
Pde6bP23440 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6bP23440 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6bP23440 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.87■□□□□ 0.93
Pde6bP23440 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6bP23440 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms