Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a2P08122 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.23■□□□□ 0.51
Col4a2P08122 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a2P08122 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.23■□□□□ 0.51
Col4a2P08122 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col4a2P08122 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a2P08122 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a2P08122 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a2P08122 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a2P08122 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col4a2P08122 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.22■□□□□ 0.51
Col4a2P08122 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.22■□□□□ 0.51
Col4a2P08122 Gm37856-201ENSMUST00000191634 999 ntBASIC18.22■□□□□ 0.51
Col4a2P08122 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.22■□□□□ 0.51
Col4a2P08122 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.22■□□□□ 0.51
Col4a2P08122 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col4a2P08122 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a2P08122 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.21■□□□□ 0.51
Col4a2P08122 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col4a2P08122 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col4a2P08122 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a2P08122 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.2■□□□□ 0.5
Col4a2P08122 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.2■□□□□ 0.5
Col4a2P08122 Gm6365-201ENSMUST00000054711 744 ntBASIC18.2■□□□□ 0.5
Col4a2P08122 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a2P08122 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.19■□□□□ 0.5
Col4a2P08122 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col4a2P08122 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
Col4a2P08122 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a2P08122 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a2P08122 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a2P08122 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col4a2P08122 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.18■□□□□ 0.5
Col4a2P08122 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a2P08122 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
Col4a2P08122 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col4a2P08122 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col4a2P08122 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a2P08122 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.18■□□□□ 0.5
Col4a2P08122 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a2P08122 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a2P08122 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a2P08122 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a2P08122 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Col4a2P08122 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Col4a2P08122 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col4a2P08122 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Trmt13-210ENSMUST00000198454 880 ntBASIC18.16■□□□□ 0.5
Col4a2P08122 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a2P08122 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms