Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cd74P04441 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.11■□□□□ 0.17
Cd74P04441 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd74P04441 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Cd74P04441 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Spcs1-204ENSMUST00000226782 949 ntBASIC16.11■□□□□ 0.17
Cd74P04441 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd74P04441 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd74P04441 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd74P04441 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.09■□□□□ 0.17
Cd74P04441 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.09■□□□□ 0.17
Cd74P04441 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Cd74P04441 Gm43173-201ENSMUST00000202246 593 ntBASIC16.09■□□□□ 0.17
Cd74P04441 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cd74P04441 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Rarb-207ENSMUST00000225921 2756 ntBASIC16.09■□□□□ 0.17
Cd74P04441 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd74P04441 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cd74P04441 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cd74P04441 Gm26833-201ENSMUST00000180899 440 ntBASIC16.08■□□□□ 0.16
Cd74P04441 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.08■□□□□ 0.16
Cd74P04441 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.08■□□□□ 0.16
Cd74P04441 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cd74P04441 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd74P04441 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd74P04441 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd74P04441 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.08■□□□□ 0.16
Cd74P04441 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.08■□□□□ 0.16
Cd74P04441 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.07■□□□□ 0.16
Cd74P04441 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.07■□□□□ 0.16
Cd74P04441 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd74P04441 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cd74P04441 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.06■□□□□ 0.16
Cd74P04441 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd74P04441 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cd74P04441 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.06■□□□□ 0.16
Cd74P04441 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cd74P04441 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd74P04441 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.05■□□□□ 0.16
Cd74P04441 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cd74P04441 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cd74P04441 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd74P04441 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms