Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Gm45364-201ENSMUST00000210883 159 ntBASIC13.66□□□□□ -0.22
Hbb-b1P02088 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.65□□□□□ -0.22
Hbb-b1P02088 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hbb-b1P02088 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hbb-b1P02088 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.64□□□□□ -0.23
Hbb-b1P02088 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hbb-b1P02088 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hbb-b1P02088 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.62□□□□□ -0.23
Hbb-b1P02088 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.62□□□□□ -0.23
Hbb-b1P02088 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.62□□□□□ -0.23
Hbb-b1P02088 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-b1P02088 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms