Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CopeO89079 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CopeO89079 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CopeO89079 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CopeO89079 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.87■□□□□ 0.77
CopeO89079 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CopeO89079 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.86■□□□□ 0.77
CopeO89079 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.86■□□□□ 0.77
CopeO89079 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.86■□□□□ 0.77
CopeO89079 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.86■□□□□ 0.77
CopeO89079 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CopeO89079 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CopeO89079 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CopeO89079 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CopeO89079 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CopeO89079 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CopeO89079 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CopeO89079 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.84■□□□□ 0.77
CopeO89079 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.84■□□□□ 0.77
CopeO89079 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.84■□□□□ 0.77
CopeO89079 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.84■□□□□ 0.77
CopeO89079 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CopeO89079 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CopeO89079 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CopeO89079 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CopeO89079 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CopeO89079 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CopeO89079 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CopeO89079 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CopeO89079 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CopeO89079 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopeO89079 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CopeO89079 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopeO89079 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.82■□□□□ 0.76
CopeO89079 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.82■□□□□ 0.76
CopeO89079 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CopeO89079 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CopeO89079 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CopeO89079 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CopeO89079 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopeO89079 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CopeO89079 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.82■□□□□ 0.76
CopeO89079 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CopeO89079 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
CopeO89079 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CopeO89079 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CopeO89079 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CopeO89079 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CopeO89079 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CopeO89079 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms