Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.37■□□□□ 0.37
Abcd4O89016 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcd4O89016 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcd4O89016 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Abcd4O89016 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.37■□□□□ 0.37
Abcd4O89016 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.37■□□□□ 0.37
Abcd4O89016 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcd4O89016 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcd4O89016 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.36■□□□□ 0.37
Abcd4O89016 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Gm10849-201ENSMUST00000100397 618 ntBASIC17.36■□□□□ 0.37
Abcd4O89016 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.36■□□□□ 0.37
Abcd4O89016 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcd4O89016 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Abcd4O89016 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Abcd4O89016 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Abcd4O89016 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcd4O89016 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.35■□□□□ 0.37
Abcd4O89016 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Abcd4O89016 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Abcd4O89016 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Abcd4O89016 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Gm27801-201ENSMUST00000184174 223 ntBASIC17.34■□□□□ 0.37
Abcd4O89016 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.34■□□□□ 0.37
Abcd4O89016 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Gm9988-201ENSMUST00000069786 435 ntBASIC17.34■□□□□ 0.37
Abcd4O89016 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Abcd4O89016 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcd4O89016 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abcd4O89016 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Abcd4O89016 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcd4O89016 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.33■□□□□ 0.36
Abcd4O89016 AV356131-201ENSMUST00000206201 750 ntBASIC17.33■□□□□ 0.36
Abcd4O89016 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Abcd4O89016 Gm10033-202ENSMUST00000211874 928 ntBASIC17.33■□□□□ 0.36
Abcd4O89016 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.33■□□□□ 0.36
Abcd4O89016 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcd4O89016 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcd4O89016 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abcd4O89016 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.32■□□□□ 0.36
Abcd4O89016 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.32■□□□□ 0.36
Abcd4O89016 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.32■□□□□ 0.36
Abcd4O89016 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.32■□□□□ 0.36
Abcd4O89016 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abcd4O89016 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Abcd4O89016 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.31■□□□□ 0.36
Abcd4O89016 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abcd4O89016 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Abcd4O89016 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
Abcd4O89016 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Abcd4O89016 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abcd4O89016 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms