Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.14■□□□□ 0.33
Hdac3O88895 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.14■□□□□ 0.33
Hdac3O88895 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Hdac3O88895 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac3O88895 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac3O88895 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hdac3O88895 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Hdac3O88895 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.13■□□□□ 0.33
Hdac3O88895 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.13■□□□□ 0.33
Hdac3O88895 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.13■□□□□ 0.33
Hdac3O88895 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hdac3O88895 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac3O88895 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.12■□□□□ 0.33
Hdac3O88895 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.12■□□□□ 0.33
Hdac3O88895 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hdac3O88895 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac3O88895 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Hdac3O88895 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac3O88895 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac3O88895 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.11■□□□□ 0.33
Hdac3O88895 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hdac3O88895 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac3O88895 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac3O88895 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac3O88895 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Gm12821-201ENSMUST00000120022 600 ntBASIC17.1■□□□□ 0.33
Hdac3O88895 Gm21956-201ENSMUST00000179946 522 ntBASIC17.1■□□□□ 0.33
Hdac3O88895 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac3O88895 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
Hdac3O88895 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.1■□□□□ 0.33
Hdac3O88895 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac3O88895 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.1■□□□□ 0.33
Hdac3O88895 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac3O88895 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac3O88895 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac3O88895 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.09■□□□□ 0.33
Hdac3O88895 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac3O88895 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Golph3-205ENSMUST00000228671 2842 ntBASIC17.09■□□□□ 0.33
Hdac3O88895 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hdac3O88895 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.09■□□□□ 0.33
Hdac3O88895 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hdac3O88895 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Hdac3O88895 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Hdac3O88895 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac3O88895 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac3O88895 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hdac3O88895 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac3O88895 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac3O88895 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac3O88895 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac3O88895 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms