Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Best1O88870 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Best1O88870 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.63■□□□□ 0.57
Best1O88870 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.63■□□□□ 0.57
Best1O88870 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Best1O88870 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Best1O88870 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Best1O88870 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Best1O88870 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Best1O88870 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Best1O88870 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Best1O88870 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Best1O88870 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Best1O88870 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Best1O88870 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Best1O88870 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Best1O88870 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.61■□□□□ 0.57
Best1O88870 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.61■□□□□ 0.57
Best1O88870 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Best1O88870 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Best1O88870 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.6■□□□□ 0.57
Best1O88870 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.6■□□□□ 0.57
Best1O88870 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Best1O88870 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.6■□□□□ 0.57
Best1O88870 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Best1O88870 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.6■□□□□ 0.57
Best1O88870 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Best1O88870 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Best1O88870 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Best1O88870 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.59■□□□□ 0.57
Best1O88870 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Best1O88870 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.59■□□□□ 0.57
Best1O88870 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.59■□□□□ 0.57
Best1O88870 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Best1O88870 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Best1O88870 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Best1O88870 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Best1O88870 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Best1O88870 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Best1O88870 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Best1O88870 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Best1O88870 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Best1O88870 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Best1O88870 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Best1O88870 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Best1O88870 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Best1O88870 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Best1O88870 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Best1O88870 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Best1O88870 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Best1O88870 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Best1O88870 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Best1O88870 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Best1O88870 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Best1O88870 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Best1O88870 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Best1O88870 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
Best1O88870 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Best1O88870 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Best1O88870 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Best1O88870 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Best1O88870 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms