Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.71■□□□□ 0.75
ShdO88834 Gm40848-201ENSMUST00000221998 324 ntBASIC19.71■□□□□ 0.75
ShdO88834 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShdO88834 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.71■□□□□ 0.75
ShdO88834 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShdO88834 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShdO88834 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ShdO88834 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ShdO88834 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ShdO88834 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ShdO88834 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.7■□□□□ 0.74
ShdO88834 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShdO88834 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ShdO88834 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
ShdO88834 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ShdO88834 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShdO88834 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
ShdO88834 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ShdO88834 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ShdO88834 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.68■□□□□ 0.74
ShdO88834 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ShdO88834 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ShdO88834 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShdO88834 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
ShdO88834 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.67■□□□□ 0.74
ShdO88834 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ShdO88834 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.67■□□□□ 0.74
ShdO88834 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.67■□□□□ 0.74
ShdO88834 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShdO88834 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.66■□□□□ 0.74
ShdO88834 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.66■□□□□ 0.74
ShdO88834 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ShdO88834 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ShdO88834 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ShdO88834 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ShdO88834 Gm26833-201ENSMUST00000180899 440 ntBASIC19.65■□□□□ 0.74
ShdO88834 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.65■□□□□ 0.74
ShdO88834 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.65■□□□□ 0.74
ShdO88834 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.65■□□□□ 0.74
ShdO88834 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ShdO88834 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ShdO88834 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ShdO88834 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ShdO88834 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ShdO88834 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ShdO88834 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ShdO88834 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ShdO88834 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ShdO88834 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ShdO88834 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShdO88834 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.63■□□□□ 0.73
ShdO88834 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShdO88834 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShdO88834 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms