Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.37■□□□□ 0.53
Hcn1O88704 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hcn1O88704 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hcn1O88704 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.36■□□□□ 0.53
Hcn1O88704 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Hcn1O88704 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hcn1O88704 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Serp2-204ENSMUST00000228055 705 ntBASIC18.36■□□□□ 0.53
Hcn1O88704 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Hcn1O88704 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn1O88704 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn1O88704 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.34■□□□□ 0.53
Hcn1O88704 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Gm43173-201ENSMUST00000202246 593 ntBASIC18.34■□□□□ 0.53
Hcn1O88704 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hcn1O88704 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Hcn1O88704 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn1O88704 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn1O88704 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.33■□□□□ 0.53
Hcn1O88704 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.33■□□□□ 0.53
Hcn1O88704 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn1O88704 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn1O88704 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.33■□□□□ 0.52
Hcn1O88704 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hcn1O88704 Gm43017-201ENSMUST00000198296 752 ntBASIC18.33■□□□□ 0.52
Hcn1O88704 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Hcn1O88704 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn1O88704 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Hcn1O88704 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.33■□□□□ 0.52
Hcn1O88704 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn1O88704 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Hcn1O88704 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hcn1O88704 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.32■□□□□ 0.52
Hcn1O88704 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.32■□□□□ 0.52
Hcn1O88704 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.32■□□□□ 0.52
Hcn1O88704 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn1O88704 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hcn1O88704 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcn1O88704 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.31■□□□□ 0.52
Hcn1O88704 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.31■□□□□ 0.52
Hcn1O88704 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.31■□□□□ 0.52
Hcn1O88704 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcn1O88704 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.31■□□□□ 0.52
Hcn1O88704 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.31■□□□□ 0.52
Hcn1O88704 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn1O88704 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Hcn1O88704 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Hcn1O88704 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Hcn1O88704 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hcn1O88704 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn1O88704 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.3■□□□□ 0.52
Hcn1O88704 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms