Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc28a2O88627 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a2O88627 Gm12922-201ENSMUST00000120626 809 ntBASIC17.09■□□□□ 0.33
Slc28a2O88627 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc28a2O88627 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc28a2O88627 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.09■□□□□ 0.33
Slc28a2O88627 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a2O88627 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a2O88627 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a2O88627 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Slc28a2O88627 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a2O88627 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a2O88627 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.08■□□□□ 0.32
Slc28a2O88627 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a2O88627 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a2O88627 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a2O88627 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a2O88627 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc28a2O88627 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Slc28a2O88627 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Slc28a2O88627 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc28a2O88627 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc28a2O88627 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a2O88627 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc28a2O88627 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Golgb1-201ENSMUST00000023534 498 ntBASIC17.06■□□□□ 0.32
Slc28a2O88627 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc28a2O88627 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a2O88627 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc28a2O88627 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc28a2O88627 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.05■□□□□ 0.32
Slc28a2O88627 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Slc28a2O88627 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc28a2O88627 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.04■□□□□ 0.32
Slc28a2O88627 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Slc28a2O88627 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Slc28a2O88627 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc28a2O88627 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slc28a2O88627 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc28a2O88627 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slc28a2O88627 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc28a2O88627 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc28a2O88627 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms