Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.48■□□□□ 0.23
Cldn1O88551 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn1O88551 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.47■□□□□ 0.23
Cldn1O88551 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.47■□□□□ 0.23
Cldn1O88551 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.47■□□□□ 0.23
Cldn1O88551 Mir6236-201ENSMUST00000184437 123 ntBASIC16.47■□□□□ 0.23
Cldn1O88551 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn1O88551 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Cldn1O88551 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.46■□□□□ 0.23
Cldn1O88551 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cldn1O88551 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cldn1O88551 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cldn1O88551 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Iqck-206ENSMUST00000208658 2891 ntBASIC16.46■□□□□ 0.23
Cldn1O88551 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn1O88551 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cldn1O88551 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.45■□□□□ 0.22
Cldn1O88551 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cldn1O88551 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn1O88551 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cldn1O88551 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.44■□□□□ 0.22
Cldn1O88551 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cldn1O88551 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.44■□□□□ 0.22
Cldn1O88551 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.44■□□□□ 0.22
Cldn1O88551 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.44■□□□□ 0.22
Cldn1O88551 Gm20049-201ENSMUST00000219950 730 ntBASIC16.44■□□□□ 0.22
Cldn1O88551 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cldn1O88551 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.44■□□□□ 0.22
Cldn1O88551 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn1O88551 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.44■□□□□ 0.22
Cldn1O88551 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.43■□□□□ 0.22
Cldn1O88551 Gm6365-201ENSMUST00000054711 744 ntBASIC16.43■□□□□ 0.22
Cldn1O88551 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 Gm10812-201ENSMUST00000099864 546 ntBASIC16.43■□□□□ 0.22
Cldn1O88551 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.43■□□□□ 0.22
Cldn1O88551 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn1O88551 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn1O88551 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn1O88551 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn1O88551 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cldn1O88551 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.42■□□□□ 0.22
Cldn1O88551 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.42■□□□□ 0.22
Cldn1O88551 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn1O88551 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn1O88551 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldn1O88551 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cldn1O88551 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.41■□□□□ 0.22
Cldn1O88551 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn1O88551 Mir6982-201ENSMUST00000184354 68 ntBASIC16.41■□□□□ 0.22
Cldn1O88551 Gm7977-201ENSMUST00000193787 748 ntBASIC16.41■□□□□ 0.22
Cldn1O88551 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldn1O88551 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.41■□□□□ 0.22
Cldn1O88551 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn1O88551 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn1O88551 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.41■□□□□ 0.22
Cldn1O88551 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.41■□□□□ 0.22
Cldn1O88551 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn1O88551 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms