Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cops4O88544 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cops4O88544 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cops4O88544 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.75■□□□□ 0.43
Cops4O88544 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cops4O88544 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
Cops4O88544 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cops4O88544 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cops4O88544 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops4O88544 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cops4O88544 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Cops4O88544 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cops4O88544 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cops4O88544 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
Cops4O88544 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cops4O88544 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Rarb-207ENSMUST00000225921 2756 ntBASIC17.73■□□□□ 0.43
Cops4O88544 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops4O88544 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cops4O88544 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cops4O88544 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cops4O88544 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.72■□□□□ 0.43
Cops4O88544 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops4O88544 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cops4O88544 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Cops4O88544 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops4O88544 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cops4O88544 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cops4O88544 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.7■□□□□ 0.42
Cops4O88544 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.7■□□□□ 0.42
Cops4O88544 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.7■□□□□ 0.42
Cops4O88544 Mir6236-201ENSMUST00000184437 123 ntBASIC17.7■□□□□ 0.42
Cops4O88544 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.7■□□□□ 0.42
Cops4O88544 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.7■□□□□ 0.42
Cops4O88544 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cops4O88544 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.7■□□□□ 0.42
Cops4O88544 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cops4O88544 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops4O88544 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cops4O88544 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.69■□□□□ 0.42
Cops4O88544 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 BC021767-201ENSMUST00000126387 1716 ntBASIC17.69■□□□□ 0.42
Cops4O88544 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops4O88544 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops4O88544 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops4O88544 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops4O88544 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops4O88544 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cops4O88544 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms