Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.42■□□□□ 0.54
Tgfbr3O88393 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Gm10252-201ENSMUST00000209541 832 ntBASIC18.42■□□□□ 0.54
Tgfbr3O88393 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.42■□□□□ 0.54
Tgfbr3O88393 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr3O88393 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr3O88393 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Gm13168-201ENSMUST00000121771 632 ntBASIC18.4■□□□□ 0.54
Tgfbr3O88393 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.4■□□□□ 0.54
Tgfbr3O88393 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tgfbr3O88393 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.39■□□□□ 0.53
Tgfbr3O88393 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Tgfbr3O88393 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr3O88393 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.38■□□□□ 0.53
Tgfbr3O88393 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr3O88393 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.37■□□□□ 0.53
Tgfbr3O88393 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Gm37856-201ENSMUST00000191634 999 ntBASIC18.37■□□□□ 0.53
Tgfbr3O88393 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.37■□□□□ 0.53
Tgfbr3O88393 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Tgfbr3O88393 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.36■□□□□ 0.53
Tgfbr3O88393 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tgfbr3O88393 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.36■□□□□ 0.53
Tgfbr3O88393 Gm7860-201ENSMUST00000121190 879 ntBASIC18.36■□□□□ 0.53
Tgfbr3O88393 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.36■□□□□ 0.53
Tgfbr3O88393 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tgfbr3O88393 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Tgfbr3O88393 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.35■□□□□ 0.53
Tgfbr3O88393 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.35■□□□□ 0.53
Tgfbr3O88393 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr3O88393 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms