Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdh16O88338 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdh16O88338 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh16O88338 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.85■□□□□ 0.61
Cdh16O88338 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh16O88338 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh16O88338 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdh16O88338 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
Cdh16O88338 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.84■□□□□ 0.61
Cdh16O88338 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Cdh16O88338 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh16O88338 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh16O88338 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh16O88338 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.83■□□□□ 0.61
Cdh16O88338 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh16O88338 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cdh16O88338 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.83■□□□□ 0.6
Cdh16O88338 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh16O88338 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cdh16O88338 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh16O88338 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh16O88338 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdh16O88338 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cdh16O88338 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.81■□□□□ 0.6
Cdh16O88338 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdh16O88338 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh16O88338 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdh16O88338 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdh16O88338 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdh16O88338 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdh16O88338 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.8■□□□□ 0.6
Cdh16O88338 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.8■□□□□ 0.6
Cdh16O88338 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh16O88338 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdh16O88338 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.79■□□□□ 0.6
Cdh16O88338 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdh16O88338 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh16O88338 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdh16O88338 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh16O88338 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdh16O88338 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.78■□□□□ 0.6
Cdh16O88338 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh16O88338 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh16O88338 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh16O88338 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdh16O88338 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.77■□□□□ 0.6
Cdh16O88338 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms