Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC25.46■■□□□ 1.67
Ubr1O70481 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC25.46■■□□□ 1.67
Ubr1O70481 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr1O70481 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ubr1O70481 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr1O70481 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC25.45■■□□□ 1.66
Ubr1O70481 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr1O70481 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr1O70481 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Gm32699-201ENSMUST00000221728 1988 ntBASIC25.44■■□□□ 1.66
Ubr1O70481 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC25.44■■□□□ 1.66
Ubr1O70481 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Gm13168-201ENSMUST00000121771 632 ntBASIC25.44■■□□□ 1.66
Ubr1O70481 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr1O70481 Rab3c-203ENSMUST00000224180 967 ntBASIC25.44■■□□□ 1.66
Ubr1O70481 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Ubr1O70481 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Ubr1O70481 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
Ubr1O70481 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr1O70481 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC25.43■■□□□ 1.66
Ubr1O70481 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr1O70481 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr1O70481 Gm20100-201ENSMUST00000209418 2272 ntBASIC25.42■■□□□ 1.66
Ubr1O70481 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr1O70481 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr1O70481 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC25.42■■□□□ 1.66
Ubr1O70481 Trmt13-210ENSMUST00000198454 880 ntBASIC25.42■■□□□ 1.66
Ubr1O70481 AC135637.1-201ENSMUST00000227750 365 ntBASIC25.42■■□□□ 1.66
Ubr1O70481 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Ubr1O70481 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr1O70481 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC25.41■■□□□ 1.66
Ubr1O70481 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.41■■□□□ 1.66
Ubr1O70481 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Ubr1O70481 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Ubr1O70481 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr1O70481 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Ubr1O70481 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr1O70481 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr1O70481 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr1O70481 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC25.4■■□□□ 1.66
Ubr1O70481 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ubr1O70481 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ubr1O70481 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ubr1O70481 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Ubr1O70481 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ubr1O70481 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ubr1O70481 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ubr1O70481 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC25.39■■□□□ 1.65
Ubr1O70481 Gm44878-201ENSMUST00000205812 1295 ntBASIC25.39■■□□□ 1.65
Ubr1O70481 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ubr1O70481 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Ubr1O70481 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Gm27275-201ENSMUST00000184318 272 ntBASIC25.38■■□□□ 1.65
Ubr1O70481 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr1O70481 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Ubr1O70481 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr1O70481 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr1O70481 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Ubr1O70481 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Ubr1O70481 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr1O70481 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr1O70481 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC25.36■■□□□ 1.65
Ubr1O70481 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Ubr1O70481 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr1O70481 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr1O70481 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Ubr1O70481 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC25.36■■□□□ 1.65
Ubr1O70481 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr1O70481 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr1O70481 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr1O70481 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms