Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgceO70258 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SgceO70258 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgceO70258 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SgceO70258 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Gm12821-201ENSMUST00000120022 600 ntBASIC17.15■□□□□ 0.34
SgceO70258 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.15■□□□□ 0.34
SgceO70258 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SgceO70258 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.15■□□□□ 0.34
SgceO70258 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgceO70258 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SgceO70258 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Golph3-202ENSMUST00000226517 2359 ntBASIC17.14■□□□□ 0.33
SgceO70258 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.14■□□□□ 0.33
SgceO70258 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SgceO70258 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgceO70258 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.13■□□□□ 0.33
SgceO70258 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SgceO70258 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgceO70258 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
SgceO70258 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.12■□□□□ 0.33
SgceO70258 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.12■□□□□ 0.33
SgceO70258 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SgceO70258 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SgceO70258 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.12■□□□□ 0.33
SgceO70258 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgceO70258 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgceO70258 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgceO70258 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.11■□□□□ 0.33
SgceO70258 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.11■□□□□ 0.33
SgceO70258 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgceO70258 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgceO70258 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.1■□□□□ 0.33
SgceO70258 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.1■□□□□ 0.33
SgceO70258 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Gm12251-201ENSMUST00000117893 792 ntBASIC17.1■□□□□ 0.33
SgceO70258 Mir7075-201ENSMUST00000184187 82 ntBASIC17.1■□□□□ 0.33
SgceO70258 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.1■□□□□ 0.33
SgceO70258 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
SgceO70258 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgceO70258 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.09■□□□□ 0.33
SgceO70258 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.09■□□□□ 0.33
SgceO70258 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Gm27454-201ENSMUST00000185090 204 ntBASIC17.09■□□□□ 0.33
SgceO70258 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.09■□□□□ 0.33
SgceO70258 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgceO70258 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms