Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.35□□□□□ -0.11
Rpl35aO55142 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpl35aO55142 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl35aO55142 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl35aO55142 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl35aO55142 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl35aO55142 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl35aO55142 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpl35aO55142 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rpl35aO55142 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl35aO55142 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl35aO55142 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rpl35aO55142 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl35aO55142 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpl35aO55142 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rpl35aO55142 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpl35aO55142 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rpl35aO55142 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.32□□□□□ -0.12
Rpl35aO55142 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpl35aO55142 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl35aO55142 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpl35aO55142 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpl35aO55142 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl35aO55142 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpl35aO55142 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Rpl35aO55142 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl35aO55142 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.3□□□□□ -0.12
Rpl35aO55142 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl35aO55142 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Gm5874-201ENSMUST00000096101 508 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms