Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6dO55057 Rarb-207ENSMUST00000225921 2756 ntBASIC15.22■□□□□ 0.03
Pde6dO55057 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6dO55057 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.21■□□□□ 0.03
Pde6dO55057 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.21■□□□□ 0.03
Pde6dO55057 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pde6dO55057 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.21■□□□□ 0.03
Pde6dO55057 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6dO55057 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pde6dO55057 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.2■□□□□ 0.02
Pde6dO55057 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pde6dO55057 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pde6dO55057 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.19■□□□□ 0.02
Pde6dO55057 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pde6dO55057 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.19■□□□□ 0.02
Pde6dO55057 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.18■□□□□ 0.02
Pde6dO55057 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pde6dO55057 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pde6dO55057 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pde6dO55057 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pde6dO55057 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pde6dO55057 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pde6dO55057 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.17■□□□□ 0.02
Pde6dO55057 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.17■□□□□ 0.02
Pde6dO55057 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pde6dO55057 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.17■□□□□ 0.02
Pde6dO55057 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pde6dO55057 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms