Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cxcl13O55038 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl13O55038 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl13O55038 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cxcl13O55038 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl13O55038 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cxcl13O55038 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Cxcl13O55038 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.36■□□□□ 0.21
Cxcl13O55038 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cxcl13O55038 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cxcl13O55038 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl13O55038 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.35■□□□□ 0.21
Cxcl13O55038 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cxcl13O55038 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cxcl13O55038 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl13O55038 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl13O55038 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl13O55038 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.34■□□□□ 0.21
Cxcl13O55038 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cxcl13O55038 Gm7860-201ENSMUST00000121190 879 ntBASIC16.34■□□□□ 0.21
Cxcl13O55038 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.34■□□□□ 0.21
Cxcl13O55038 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.34■□□□□ 0.21
Cxcl13O55038 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl13O55038 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cxcl13O55038 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cxcl13O55038 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cxcl13O55038 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.33■□□□□ 0.2
Cxcl13O55038 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Cxcl13O55038 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cxcl13O55038 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl13O55038 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cxcl13O55038 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.32■□□□□ 0.2
Cxcl13O55038 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.32■□□□□ 0.2
Cxcl13O55038 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.32■□□□□ 0.2
Cxcl13O55038 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl13O55038 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl13O55038 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.32■□□□□ 0.2
Cxcl13O55038 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl13O55038 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl13O55038 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl13O55038 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl13O55038 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cxcl13O55038 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cxcl13O55038 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl13O55038 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Cxcl13O55038 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Gm13534-201ENSMUST00000121169 513 ntBASIC16.3■□□□□ 0.2
Cxcl13O55038 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.3■□□□□ 0.2
Cxcl13O55038 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.3■□□□□ 0.2
Cxcl13O55038 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.3■□□□□ 0.2
Cxcl13O55038 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.3■□□□□ 0.2
Cxcl13O55038 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl13O55038 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Mir5133-201ENSMUST00000174955 77 ntBASIC16.29■□□□□ 0.2
Cxcl13O55038 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cxcl13O55038 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms