Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cntnap1O54991 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cntnap1O54991 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cntnap1O54991 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cntnap1O54991 AC163280.1-201ENSMUST00000228194 1100 ntBASIC25.46■■□□□ 1.67
Cntnap1O54991 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cntnap1O54991 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cntnap1O54991 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cntnap1O54991 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.46■■□□□ 1.67
Cntnap1O54991 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cntnap1O54991 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cntnap1O54991 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.67
Cntnap1O54991 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cntnap1O54991 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cntnap1O54991 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cntnap1O54991 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.66
Cntnap1O54991 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Cntnap1O54991 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cntnap1O54991 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC25.44■■□□□ 1.66
Cntnap1O54991 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC25.44■■□□□ 1.66
Cntnap1O54991 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Cntnap1O54991 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cntnap1O54991 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Cntnap1O54991 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC25.44■■□□□ 1.66
Cntnap1O54991 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cntnap1O54991 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cntnap1O54991 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
Cntnap1O54991 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.43■■□□□ 1.66
Cntnap1O54991 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cntnap1O54991 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Cntnap1O54991 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.43■■□□□ 1.66
Cntnap1O54991 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
Cntnap1O54991 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cntnap1O54991 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Cntnap1O54991 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC25.42■■□□□ 1.66
Cntnap1O54991 Gm7860-201ENSMUST00000121190 879 ntBASIC25.42■■□□□ 1.66
Cntnap1O54991 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC25.42■■□□□ 1.66
Cntnap1O54991 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cntnap1O54991 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cntnap1O54991 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC25.42■■□□□ 1.66
Cntnap1O54991 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC25.41■■□□□ 1.66
Cntnap1O54991 Gm13559-201ENSMUST00000120476 863 ntBASIC25.41■■□□□ 1.66
Cntnap1O54991 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC25.41■■□□□ 1.66
Cntnap1O54991 Gm30025-201ENSMUST00000218555 728 ntBASIC25.41■■□□□ 1.66
Cntnap1O54991 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC25.41■■□□□ 1.66
Cntnap1O54991 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Cntnap1O54991 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cntnap1O54991 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cntnap1O54991 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Cntnap1O54991 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC25.4■■□□□ 1.66
Cntnap1O54991 Gm15847-201ENSMUST00000121417 1065 ntBASIC25.4■■□□□ 1.66
Cntnap1O54991 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC25.4■■□□□ 1.66
Cntnap1O54991 Gm21814-202ENSMUST00000203277 873 ntBASIC25.4■■□□□ 1.66
Cntnap1O54991 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cntnap1O54991 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC25.4■■□□□ 1.66
Cntnap1O54991 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cntnap1O54991 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cntnap1O54991 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cntnap1O54991 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cntnap1O54991 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC25.39■■□□□ 1.65
Cntnap1O54991 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Cntnap1O54991 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cntnap1O54991 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC25.39■■□□□ 1.65
Cntnap1O54991 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cntnap1O54991 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cntnap1O54991 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cntnap1O54991 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cntnap1O54991 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cntnap1O54991 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cntnap1O54991 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cntnap1O54991 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cntnap1O54991 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cntnap1O54991 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC25.37■■□□□ 1.65
Cntnap1O54991 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cntnap1O54991 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cntnap1O54991 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cntnap1O54991 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cntnap1O54991 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC25.36■■□□□ 1.65
Cntnap1O54991 Gm7889-201ENSMUST00000185591 958 ntBASIC25.36■■□□□ 1.65
Cntnap1O54991 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cntnap1O54991 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cntnap1O54991 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cntnap1O54991 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cntnap1O54991 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cntnap1O54991 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Cntnap1O54991 Gm27032-201ENSMUST00000183124 1116 ntBASIC25.35■■□□□ 1.65
Cntnap1O54991 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cntnap1O54991 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Cntnap1O54991 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cntnap1O54991 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cntnap1O54991 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC25.34■■□□□ 1.65
Cntnap1O54991 Gm25925-201ENSMUST00000158314 306 ntBASIC25.34■■□□□ 1.65
Cntnap1O54991 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms