Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Limk2O54785 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.61■□□□□ 0.73
Limk2O54785 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.61■□□□□ 0.73
Limk2O54785 Gm18671-201ENSMUST00000214826 683 ntBASIC19.61■□□□□ 0.73
Limk2O54785 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk2O54785 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk2O54785 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk2O54785 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk2O54785 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.59■□□□□ 0.73
Limk2O54785 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk2O54785 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk2O54785 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk2O54785 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk2O54785 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Limk2O54785 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk2O54785 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Limk2O54785 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Limk2O54785 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Limk2O54785 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.57■□□□□ 0.72
Limk2O54785 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Limk2O54785 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Limk2O54785 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk2O54785 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Limk2O54785 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.56■□□□□ 0.72
Limk2O54785 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.56■□□□□ 0.72
Limk2O54785 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk2O54785 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk2O54785 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.54■□□□□ 0.72
Limk2O54785 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Limk2O54785 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.54■□□□□ 0.72
Limk2O54785 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Limk2O54785 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 AV356131-201ENSMUST00000206201 750 ntBASIC19.54■□□□□ 0.72
Limk2O54785 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Limk2O54785 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.54■□□□□ 0.72
Limk2O54785 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Limk2O54785 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk2O54785 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk2O54785 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk2O54785 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Limk2O54785 Gm42778-201ENSMUST00000199644 553 ntBASIC19.53■□□□□ 0.72
Limk2O54785 Gm10033-202ENSMUST00000211874 928 ntBASIC19.53■□□□□ 0.72
Limk2O54785 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk2O54785 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Limk2O54785 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Limk2O54785 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Limk2O54785 Gm27801-201ENSMUST00000184174 223 ntBASIC19.52■□□□□ 0.72
Limk2O54785 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.52■□□□□ 0.72
Limk2O54785 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms