Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Gm17971-201ENSMUST00000190239 806 ntBASIC18.37■□□□□ 0.53
Abca4O35600 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Abca4O35600 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abca4O35600 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abca4O35600 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Abca4O35600 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Abca4O35600 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
Abca4O35600 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.35■□□□□ 0.53
Abca4O35600 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.35■□□□□ 0.53
Abca4O35600 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abca4O35600 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Gm44771-201ENSMUST00000206975 626 ntBASIC18.34■□□□□ 0.53
Abca4O35600 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.34■□□□□ 0.53
Abca4O35600 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Gm6345-202ENSMUST00000180900 204 ntBASIC18.34■□□□□ 0.53
Abca4O35600 Gm30025-201ENSMUST00000218555 728 ntBASIC18.34■□□□□ 0.53
Abca4O35600 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Abca4O35600 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abca4O35600 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.33■□□□□ 0.53
Abca4O35600 Gm7461-201ENSMUST00000058918 827 ntBASIC18.33■□□□□ 0.53
Abca4O35600 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abca4O35600 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abca4O35600 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Gm13559-201ENSMUST00000120476 863 ntBASIC18.33■□□□□ 0.52
Abca4O35600 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.33■□□□□ 0.52
Abca4O35600 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca4O35600 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.33■□□□□ 0.52
Abca4O35600 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Abca4O35600 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Abca4O35600 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.32■□□□□ 0.52
Abca4O35600 Gm7889-201ENSMUST00000185591 958 ntBASIC18.32■□□□□ 0.52
Abca4O35600 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abca4O35600 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abca4O35600 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.32■□□□□ 0.52
Abca4O35600 Gm21814-202ENSMUST00000203277 873 ntBASIC18.32■□□□□ 0.52
Abca4O35600 Gm44549-201ENSMUST00000208351 577 ntBASIC18.32■□□□□ 0.52
Abca4O35600 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.31■□□□□ 0.52
Abca4O35600 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.31■□□□□ 0.52
Abca4O35600 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca4O35600 Gm2399-201ENSMUST00000104944 225 ntBASIC18.31■□□□□ 0.52
Abca4O35600 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.3■□□□□ 0.52
Abca4O35600 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca4O35600 Gm9103-201ENSMUST00000119371 405 ntBASIC18.3■□□□□ 0.52
Abca4O35600 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.3■□□□□ 0.52
Abca4O35600 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.3■□□□□ 0.52
Abca4O35600 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca4O35600 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca4O35600 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Abca4O35600 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Abca4O35600 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.29■□□□□ 0.52
Abca4O35600 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Abca4O35600 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Abca4O35600 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Abca4O35600 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Abca4O35600 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca4O35600 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.28■□□□□ 0.52
Abca4O35600 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.28■□□□□ 0.52
Abca4O35600 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca4O35600 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms