Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6bO35451 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf6bO35451 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Atf6bO35451 Smad6-203ENSMUST00000179458 273 ntBASIC16.67■□□□□ 0.26
Atf6bO35451 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf6bO35451 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atf6bO35451 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6bO35451 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Atf6bO35451 Gm26833-201ENSMUST00000180899 440 ntBASIC16.66■□□□□ 0.26
Atf6bO35451 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.66■□□□□ 0.26
Atf6bO35451 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Atf6bO35451 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6bO35451 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf6bO35451 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atf6bO35451 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf6bO35451 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6bO35451 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atf6bO35451 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Atf6bO35451 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Atf6bO35451 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Atf6bO35451 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Atf6bO35451 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.64■□□□□ 0.25
Atf6bO35451 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atf6bO35451 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6bO35451 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atf6bO35451 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.64■□□□□ 0.25
Atf6bO35451 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atf6bO35451 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Atf6bO35451 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6bO35451 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.62■□□□□ 0.25
Atf6bO35451 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Atf6bO35451 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.62■□□□□ 0.25
Atf6bO35451 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.62■□□□□ 0.25
Atf6bO35451 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atf6bO35451 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.62■□□□□ 0.25
Atf6bO35451 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6bO35451 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Gm40848-201ENSMUST00000221998 324 ntBASIC16.61■□□□□ 0.25
Atf6bO35451 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6bO35451 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atf6bO35451 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Atf6bO35451 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms