Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf2O35218 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf2O35218 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf2O35218 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf2O35218 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf2O35218 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.52■□□□□ 0.88
Cpsf2O35218 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cpsf2O35218 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Cpsf2O35218 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf2O35218 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.52■□□□□ 0.88
Cpsf2O35218 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf2O35218 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf2O35218 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf2O35218 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
Cpsf2O35218 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf2O35218 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Cpsf2O35218 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cpsf2O35218 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cpsf2O35218 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.5■□□□□ 0.87
Cpsf2O35218 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf2O35218 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf2O35218 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.5■□□□□ 0.87
Cpsf2O35218 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf2O35218 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf2O35218 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.49■□□□□ 0.87
Cpsf2O35218 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cpsf2O35218 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.49■□□□□ 0.87
Cpsf2O35218 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.49■□□□□ 0.87
Cpsf2O35218 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cpsf2O35218 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cpsf2O35218 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf2O35218 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.48■□□□□ 0.87
Cpsf2O35218 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cpsf2O35218 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cpsf2O35218 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf2O35218 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Cpsf2O35218 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.47■□□□□ 0.87
Cpsf2O35218 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.47■□□□□ 0.87
Cpsf2O35218 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cpsf2O35218 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf2O35218 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf2O35218 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf2O35218 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf2O35218 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.46■□□□□ 0.87
Cpsf2O35218 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.46■□□□□ 0.87
Cpsf2O35218 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf2O35218 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf2O35218 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cpsf2O35218 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf2O35218 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Gm12922-201ENSMUST00000120626 809 ntBASIC20.45■□□□□ 0.86
Cpsf2O35218 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf2O35218 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf2O35218 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.45■□□□□ 0.86
Cpsf2O35218 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf2O35218 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cpsf2O35218 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf2O35218 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.44■□□□□ 0.86
Cpsf2O35218 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf2O35218 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms