Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Col15a1O35206 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC25.05■■□□□ 1.6
Col15a1O35206 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.05■■□□□ 1.6
Col15a1O35206 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.05■■□□□ 1.6
Col15a1O35206 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.05■■□□□ 1.6
Col15a1O35206 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
Col15a1O35206 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Col15a1O35206 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col15a1O35206 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
Col15a1O35206 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col15a1O35206 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col15a1O35206 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Col15a1O35206 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Col15a1O35206 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col15a1O35206 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col15a1O35206 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.02■■□□□ 1.6
Col15a1O35206 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC25.02■■□□□ 1.6
Col15a1O35206 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col15a1O35206 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Col15a1O35206 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.02■■□□□ 1.6
Col15a1O35206 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.02■■□□□ 1.6
Col15a1O35206 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col15a1O35206 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Col15a1O35206 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
Col15a1O35206 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col15a1O35206 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Col15a1O35206 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col15a1O35206 Gm27275-201ENSMUST00000184318 272 ntBASIC25.01■■□□□ 1.59
Col15a1O35206 Gm10812-201ENSMUST00000099864 546 ntBASIC25.01■■□□□ 1.59
Col15a1O35206 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.01■■□□□ 1.59
Col15a1O35206 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC25■■□□□ 1.59
Col15a1O35206 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col15a1O35206 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col15a1O35206 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col15a1O35206 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
Col15a1O35206 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.99■■□□□ 1.59
Col15a1O35206 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.99■■□□□ 1.59
Col15a1O35206 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col15a1O35206 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.99■■□□□ 1.59
Col15a1O35206 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col15a1O35206 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col15a1O35206 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col15a1O35206 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col15a1O35206 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col15a1O35206 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col15a1O35206 Gm13509-201ENSMUST00000119733 1308 ntBASIC24.98■■□□□ 1.59
Col15a1O35206 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col15a1O35206 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.97■■□□□ 1.59
Col15a1O35206 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.97■■□□□ 1.59
Col15a1O35206 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col15a1O35206 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Col15a1O35206 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Col15a1O35206 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Col15a1O35206 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Col15a1O35206 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.96■■□□□ 1.59
Col15a1O35206 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col15a1O35206 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
Col15a1O35206 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col15a1O35206 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC24.95■■□□□ 1.59
Col15a1O35206 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col15a1O35206 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col15a1O35206 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col15a1O35206 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col15a1O35206 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC24.95■■□□□ 1.58
Col15a1O35206 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col15a1O35206 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col15a1O35206 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Col15a1O35206 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Col15a1O35206 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Col15a1O35206 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col15a1O35206 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Col15a1O35206 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC24.93■■□□□ 1.58
Col15a1O35206 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
Col15a1O35206 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Col15a1O35206 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col15a1O35206 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms