Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Gm26833-201ENSMUST00000180899 440 ntBASIC20.9■□□□□ 0.94
Sema4dO09126 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sema4dO09126 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sema4dO09126 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sema4dO09126 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sema4dO09126 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sema4dO09126 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sema4dO09126 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sema4dO09126 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sema4dO09126 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sema4dO09126 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sema4dO09126 Gm40848-201ENSMUST00000221998 324 ntBASIC20.89■□□□□ 0.93
Sema4dO09126 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sema4dO09126 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sema4dO09126 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sema4dO09126 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sema4dO09126 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.88■□□□□ 0.93
Sema4dO09126 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.88■□□□□ 0.93
Sema4dO09126 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sema4dO09126 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sema4dO09126 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sema4dO09126 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sema4dO09126 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sema4dO09126 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sema4dO09126 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sema4dO09126 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.87■□□□□ 0.93
Sema4dO09126 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sema4dO09126 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Sema4dO09126 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Sema4dO09126 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.86■□□□□ 0.93
Sema4dO09126 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sema4dO09126 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.85■□□□□ 0.93
Sema4dO09126 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sema4dO09126 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sema4dO09126 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sema4dO09126 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Sema4dO09126 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.84■□□□□ 0.93
Sema4dO09126 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sema4dO09126 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sema4dO09126 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sema4dO09126 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.83■□□□□ 0.93
Sema4dO09126 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sema4dO09126 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.83■□□□□ 0.93
Sema4dO09126 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sema4dO09126 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sema4dO09126 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sema4dO09126 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sema4dO09126 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Sema4dO09126 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sema4dO09126 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Gm11421-201ENSMUST00000122124 294 ntBASIC20.82■□□□□ 0.92
Sema4dO09126 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sema4dO09126 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.82■□□□□ 0.92
Sema4dO09126 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.82■□□□□ 0.92
Sema4dO09126 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sema4dO09126 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sema4dO09126 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sema4dO09126 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Sema4dO09126 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sema4dO09126 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sema4dO09126 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sema4dO09126 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Sema4dO09126 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms