Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2b3O09039 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sh2b3O09039 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
Sh2b3O09039 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.15■□□□□ 0.34
Sh2b3O09039 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh2b3O09039 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2b3O09039 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh2b3O09039 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Gm42778-201ENSMUST00000199644 553 ntBASIC17.14■□□□□ 0.33
Sh2b3O09039 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.14■□□□□ 0.33
Sh2b3O09039 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2b3O09039 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2b3O09039 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sh2b3O09039 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sh2b3O09039 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.13■□□□□ 0.33
Sh2b3O09039 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.13■□□□□ 0.33
Sh2b3O09039 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Sh2b3O09039 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2b3O09039 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh2b3O09039 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh2b3O09039 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Gm10849-201ENSMUST00000100397 618 ntBASIC17.12■□□□□ 0.33
Sh2b3O09039 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh2b3O09039 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2b3O09039 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2b3O09039 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.11■□□□□ 0.33
Sh2b3O09039 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Sh2b3O09039 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2b3O09039 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Sh2b3O09039 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2b3O09039 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2b3O09039 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.1■□□□□ 0.33
Sh2b3O09039 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sh2b3O09039 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh2b3O09039 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2b3O09039 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Sh2b3O09039 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Sh2b3O09039 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh2b3O09039 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.09■□□□□ 0.33
Sh2b3O09039 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.09■□□□□ 0.33
Sh2b3O09039 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh2b3O09039 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2b3O09039 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh2b3O09039 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2b3O09039 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2b3O09039 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms