Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.6■□□□□ 0.25
Casp6O08738 Gm6365-201ENSMUST00000054711 744 ntBASIC16.6■□□□□ 0.25
Casp6O08738 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Casp6O08738 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casp6O08738 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.59■□□□□ 0.25
Casp6O08738 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casp6O08738 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.59■□□□□ 0.25
Casp6O08738 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casp6O08738 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.59■□□□□ 0.25
Casp6O08738 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Casp6O08738 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Casp6O08738 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Casp6O08738 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Casp6O08738 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Gm4968-201ENSMUST00000071458 858 ntBASIC16.58■□□□□ 0.24
Casp6O08738 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.58■□□□□ 0.24
Casp6O08738 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Casp6O08738 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Casp6O08738 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Casp6O08738 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.57■□□□□ 0.24
Casp6O08738 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Casp6O08738 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Casp6O08738 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Casp6O08738 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Casp6O08738 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.56■□□□□ 0.24
Casp6O08738 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Gm13146-201ENSMUST00000118508 780 ntBASIC16.56■□□□□ 0.24
Casp6O08738 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.56■□□□□ 0.24
Casp6O08738 Gm8520-201ENSMUST00000186517 868 ntBASIC16.56■□□□□ 0.24
Casp6O08738 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.56■□□□□ 0.24
Casp6O08738 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Casp6O08738 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Casp6O08738 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Gm22240-201ENSMUST00000175225 82 ntBASIC16.55■□□□□ 0.24
Casp6O08738 Gm38205-201ENSMUST00000192243 258 ntBASIC16.55■□□□□ 0.24
Casp6O08738 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Casp6O08738 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Casp6O08738 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Casp6O08738 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.54■□□□□ 0.24
Casp6O08738 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Casp6O08738 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Casp6O08738 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 AA386476-201ENSMUST00000098781 1665 ntBASIC16.54■□□□□ 0.24
Casp6O08738 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Casp6O08738 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.54■□□□□ 0.24
Casp6O08738 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Casp6O08738 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Casp6O08738 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Casp6O08738 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Casp6O08738 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.53■□□□□ 0.24
Casp6O08738 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Casp6O08738 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Casp6O08738 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms