Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1bO08603 Smad6-203ENSMUST00000179458 273 ntBASIC17.07■□□□□ 0.32
Raet1bO08603 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.07■□□□□ 0.32
Raet1bO08603 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.07■□□□□ 0.32
Raet1bO08603 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Raet1bO08603 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1bO08603 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1bO08603 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.07■□□□□ 0.32
Raet1bO08603 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1bO08603 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Raet1bO08603 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Gm6139-201ENSMUST00000079261 882 ntBASIC17.06■□□□□ 0.32
Raet1bO08603 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1bO08603 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.05■□□□□ 0.32
Raet1bO08603 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.05■□□□□ 0.32
Raet1bO08603 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
Raet1bO08603 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Raet1bO08603 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1bO08603 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.04■□□□□ 0.32
Raet1bO08603 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.04■□□□□ 0.32
Raet1bO08603 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Raet1bO08603 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Raet1bO08603 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1bO08603 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Gm11421-201ENSMUST00000122124 294 ntBASIC17.03■□□□□ 0.32
Raet1bO08603 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Raet1bO08603 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1bO08603 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Raet1bO08603 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1bO08603 Iqck-206ENSMUST00000208658 2891 ntBASIC17.02■□□□□ 0.32
Raet1bO08603 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Raet1bO08603 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.02■□□□□ 0.32
Raet1bO08603 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Raet1bO08603 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Raet1bO08603 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Raet1bO08603 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1bO08603 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1bO08603 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1bO08603 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1bO08603 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Raet1bO08603 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Raet1bO08603 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.01■□□□□ 0.31
Raet1bO08603 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.01■□□□□ 0.31
Raet1bO08603 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Raet1bO08603 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1bO08603 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
Raet1bO08603 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms