Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Gm9847-201ENSMUST00000052528 599 ntBASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21788J3QNH3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.25■□□□□ 0.19
Gm21788J3QNH3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.24■□□□□ 0.19
Gm21788J3QNH3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Gm21788J3QNH3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Serp2-204ENSMUST00000228055 705 ntBASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm21788J3QNH3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm21788J3QNH3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm21788J3QNH3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm21788J3QNH3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm21788J3QNH3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms