Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-3J3QMG8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-3J3QMG8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-3J3QMG8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-3J3QMG8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-3J3QMG8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-3J3QMG8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-3J3QMG8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Gm26833-201ENSMUST00000180899 440 ntBASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-3J3QMG8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-3J3QMG8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-3J3QMG8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
Trav13d-3J3QMG8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms