Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srp72F8VQC1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srp72F8VQC1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Srp72F8VQC1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.89■□□□□ 0.61
Srp72F8VQC1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srp72F8VQC1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srp72F8VQC1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srp72F8VQC1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srp72F8VQC1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.85■□□□□ 0.61
Srp72F8VQC1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srp72F8VQC1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.84■□□□□ 0.61
Srp72F8VQC1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.84■□□□□ 0.61
Srp72F8VQC1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp72F8VQC1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Golgb1-201ENSMUST00000023534 498 ntBASIC18.83■□□□□ 0.6
Srp72F8VQC1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srp72F8VQC1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.83■□□□□ 0.6
Srp72F8VQC1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.82■□□□□ 0.6
Srp72F8VQC1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp72F8VQC1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp72F8VQC1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.81■□□□□ 0.6
Srp72F8VQC1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Srp72F8VQC1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Srp72F8VQC1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms