Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc188F6WEU2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc188F6WEU2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc188F6WEU2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc188F6WEU2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc188F6WEU2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc188F6WEU2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc188F6WEU2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc188F6WEU2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc188F6WEU2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc188F6WEU2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.77■□□□□ 0.76
Ccdc188F6WEU2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc188F6WEU2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Gm30025-201ENSMUST00000218555 728 ntBASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc188F6WEU2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Gm9103-201ENSMUST00000119371 405 ntBASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Gm7461-201ENSMUST00000058918 827 ntBASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc188F6WEU2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc188F6WEU2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc188F6WEU2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Gm13559-201ENSMUST00000120476 863 ntBASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Gm7889-201ENSMUST00000185591 958 ntBASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc188F6WEU2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc188F6WEU2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms