Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.77■□□□□ 0.76
Atf6F6VAN0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Gm8493-201ENSMUST00000196881 489 ntBASIC19.77■□□□□ 0.76
Atf6F6VAN0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
Atf6F6VAN0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atf6F6VAN0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atf6F6VAN0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Atf6F6VAN0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.76■□□□□ 0.75
Atf6F6VAN0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.76■□□□□ 0.75
Atf6F6VAN0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.76■□□□□ 0.75
Atf6F6VAN0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atf6F6VAN0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Atf6F6VAN0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.76■□□□□ 0.75
Atf6F6VAN0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
Atf6F6VAN0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atf6F6VAN0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Gm43173-201ENSMUST00000202246 593 ntBASIC19.74■□□□□ 0.75
Atf6F6VAN0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atf6F6VAN0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
Atf6F6VAN0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Atf6F6VAN0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Atf6F6VAN0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Smad6-203ENSMUST00000179458 273 ntBASIC19.71■□□□□ 0.75
Atf6F6VAN0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Atf6F6VAN0 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.7■□□□□ 0.74
Atf6F6VAN0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6F6VAN0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6F6VAN0 Gm6139-201ENSMUST00000079261 882 ntBASIC19.7■□□□□ 0.74
Atf6F6VAN0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6F6VAN0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6F6VAN0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf6F6VAN0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Atf6F6VAN0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Atf6F6VAN0 Gm11421-201ENSMUST00000122124 294 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms