Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a1E9PXX9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.17■□□□□ 0.5
Slc28a1E9PXX9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a1E9PXX9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a1E9PXX9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Gm40881-201ENSMUST00000223397 166 ntBASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc28a1E9PXX9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Slc28a1E9PXX9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc28a1E9PXX9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc28a1E9PXX9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Gm9870-201ENSMUST00000063874 645 ntBASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc28a1E9PXX9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.12■□□□□ 0.49
Slc28a1E9PXX9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc28a1E9PXX9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc28a1E9PXX9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms