Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a4A2AX52 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.27■□□□□ 0.2
Col6a4A2AX52 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Col6a4A2AX52 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col6a4A2AX52 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a4A2AX52 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a4A2AX52 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a4A2AX52 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.26■□□□□ 0.19
Col6a4A2AX52 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col6a4A2AX52 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.25■□□□□ 0.19
Col6a4A2AX52 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.25■□□□□ 0.19
Col6a4A2AX52 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.25■□□□□ 0.19
Col6a4A2AX52 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a4A2AX52 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a4A2AX52 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a4A2AX52 Gm13836-201ENSMUST00000121159 501 ntBASIC16.23■□□□□ 0.19
Col6a4A2AX52 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a4A2AX52 Dio3-201ENSMUST00000097228 1449 ntBASIC16.23■□□□□ 0.19
Col6a4A2AX52 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Gm27275-201ENSMUST00000184318 272 ntBASIC16.22■□□□□ 0.19
Col6a4A2AX52 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.22■□□□□ 0.19
Col6a4A2AX52 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.22■□□□□ 0.19
Col6a4A2AX52 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a4A2AX52 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a4A2AX52 Gm15565-201ENSMUST00000118890 427 ntBASIC16.21■□□□□ 0.19
Col6a4A2AX52 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col6a4A2AX52 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a4A2AX52 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.21■□□□□ 0.19
Col6a4A2AX52 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a4A2AX52 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a4A2AX52 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a4A2AX52 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a4A2AX52 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a4A2AX52 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a4A2AX52 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms