Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC31.11■■■□□ 2.57
Shroom2A2ALU4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Shroom2A2ALU4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Gm9103-201ENSMUST00000119371 405 ntBASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Shroom2A2ALU4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Gm33142-201ENSMUST00000193913 867 ntBASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Shroom2A2ALU4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Gm21814-202ENSMUST00000203277 873 ntBASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Gm2399-201ENSMUST00000104944 225 ntBASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Shroom2A2ALU4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Shroom2A2ALU4 AC159205.3-201ENSMUST00000224614 874 ntBASIC31.07■■■□□ 2.56
Shroom2A2ALU4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Shroom2A2ALU4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Shroom2A2ALU4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Shroom2A2ALU4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Shroom2A2ALU4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Shroom2A2ALU4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Shroom2A2ALU4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Shroom2A2ALU4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Shroom2A2ALU4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
Shroom2A2ALU4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Shroom2A2ALU4 Gm13559-201ENSMUST00000120476 863 ntBASIC31.03■■■□□ 2.56
Shroom2A2ALU4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Shroom2A2ALU4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Shroom2A2ALU4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Shroom2A2ALU4 Gm13158-201ENSMUST00000122007 736 ntBASIC31.02■■■□□ 2.56
Shroom2A2ALU4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC31.02■■■□□ 2.56
Shroom2A2ALU4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC31.02■■■□□ 2.56
Shroom2A2ALU4 Gm44549-201ENSMUST00000208351 577 ntBASIC31.01■■■□□ 2.56
Shroom2A2ALU4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC31.01■■■□□ 2.56
Shroom2A2ALU4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Shroom2A2ALU4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Shroom2A2ALU4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.01■■■□□ 2.56
Shroom2A2ALU4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Shroom2A2ALU4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Shroom2A2ALU4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Shroom2A2ALU4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Shroom2A2ALU4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Shroom2A2ALU4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC31■■■□□ 2.55
Shroom2A2ALU4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC31■■■□□ 2.55
Shroom2A2ALU4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Shroom2A2ALU4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Shroom2A2ALU4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC31■■■□□ 2.55
Shroom2A2ALU4 Gm6345-202ENSMUST00000180900 204 ntBASIC31■■■□□ 2.55
Shroom2A2ALU4 Gm7889-201ENSMUST00000185591 958 ntBASIC31■■■□□ 2.55
Shroom2A2ALU4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC31■■■□□ 2.55
Shroom2A2ALU4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Shroom2A2ALU4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Shroom2A2ALU4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Shroom2A2ALU4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Shroom2A2ALU4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC30.99■■■□□ 2.55
Shroom2A2ALU4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Shroom2A2ALU4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Ank2-226ENSMUST00000189368 339 ntBASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Gm17971-201ENSMUST00000190239 806 ntBASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Gm30025-201ENSMUST00000218555 728 ntBASIC30.98■■■□□ 2.55
Shroom2A2ALU4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
Shroom2A2ALU4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Shroom2A2ALU4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Shroom2A2ALU4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Gm37415-201ENSMUST00000192265 2054 ntBASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Shroom2A2ALU4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Shroom2A2ALU4 Gm23634-201ENSMUST00000175071 91 ntBASIC30.95■■■□□ 2.55
Shroom2A2ALU4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC30.95■■■□□ 2.55
Shroom2A2ALU4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
Shroom2A2ALU4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC30.95■■■□□ 2.55
Shroom2A2ALU4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Shroom2A2ALU4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Shroom2A2ALU4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Shroom2A2ALU4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC30.95■■■□□ 2.54
Shroom2A2ALU4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Shroom2A2ALU4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms