Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Gm5075-201ENSMUST00000196916 622 ntBASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc39aA2ACP1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc39aA2ACP1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc39aA2ACP1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc39aA2ACP1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.83■□□□□ 0.6
Ttc39aA2ACP1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.83■□□□□ 0.6
Ttc39aA2ACP1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc39aA2ACP1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc39aA2ACP1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc39aA2ACP1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc39aA2ACP1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Gm12441-201ENSMUST00000121806 588 ntBASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc39aA2ACP1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ttc39aA2ACP1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc39aA2ACP1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc39aA2ACP1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc39aA2ACP1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.77■□□□□ 0.59
Ttc39aA2ACP1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ttc39aA2ACP1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc39aA2ACP1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.76■□□□□ 0.59
Ttc39aA2ACP1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc39aA2ACP1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Ttc39aA2ACP1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms