Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3854A0A1B0GSS6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm22240-201ENSMUST00000175225 82 ntBASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3854A0A1B0GSS6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.36■□□□□ 0.69
Gm3854A0A1B0GSS6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm6211-202ENSMUST00000167849 925 ntBASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3854A0A1B0GSS6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3854A0A1B0GSS6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm3854A0A1B0GSS6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3854A0A1B0GSS6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm3854A0A1B0GSS6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm3854A0A1B0GSS6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm3854A0A1B0GSS6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.68
Gm3854A0A1B0GSS6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3854A0A1B0GSS6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm7860-201ENSMUST00000121190 879 ntBASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm8520-201ENSMUST00000186517 868 ntBASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3854A0A1B0GSS6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3854A0A1B0GSS6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3854A0A1B0GSS6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms