Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.76□□□□□ -0.05
Trbv17A0A140T8P8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Mir7075-201ENSMUST00000184187 82 ntBASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Gm27454-201ENSMUST00000185090 204 ntBASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv17A0A140T8P8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv17A0A140T8P8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv17A0A140T8P8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Gm45417-201ENSMUST00000209533 758 ntBASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv17A0A140T8P8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv17A0A140T8P8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv17A0A140T8P8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv17A0A140T8P8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv17A0A140T8P8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv17A0A140T8P8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv17A0A140T8P8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
Trbv17A0A140T8P8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms