Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Frmpd3A0A140LIW3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Frmpd3A0A140LIW3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Frmpd3A0A140LIW3 Gm11249-201ENSMUST00000117071 859 ntBASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Frmpd3A0A140LIW3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 AA386476-201ENSMUST00000098781 1665 ntBASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Frmpd3A0A140LIW3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Frmpd3A0A140LIW3 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Frmpd3A0A140LIW3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Mir5122-201ENSMUST00000175004 89 ntBASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Frmpd3A0A140LIW3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.33■■□□□ 1.32
Frmpd3A0A140LIW3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Frmpd3A0A140LIW3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Frmpd3A0A140LIW3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Gm2399-201ENSMUST00000104944 225 ntBASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Frmpd3A0A140LIW3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Frmpd3A0A140LIW3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Frmpd3A0A140LIW3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Frmpd3A0A140LIW3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Frmpd3A0A140LIW3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Frmpd3A0A140LIW3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Frmpd3A0A140LIW3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Frmpd3A0A140LIW3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Frmpd3A0A140LIW3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Frmpd3A0A140LIW3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Frmpd3A0A140LIW3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Frmpd3A0A140LIW3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms