Protein–RNA interactions for Protein: A0A140LIR9

Gm4881, Predicted gene 4881, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4881A0A140LIR9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm4881A0A140LIR9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm4881A0A140LIR9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm4881A0A140LIR9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm4881A0A140LIR9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm4881A0A140LIR9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Mir7075-201ENSMUST00000184187 82 ntBASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm4881A0A140LIR9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.77■□□□□ 0.27
Gm4881A0A140LIR9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm4881A0A140LIR9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm4881A0A140LIR9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Gm6139-201ENSMUST00000079261 882 ntBASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm4881A0A140LIR9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm4881A0A140LIR9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm4881A0A140LIR9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Gm4881A0A140LIR9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm4881A0A140LIR9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm4881A0A140LIR9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms