Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Gm8770-201ENSMUST00000121113 1109 ntBASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv29A0A0G2LB96 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv29A0A0G2LB96 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Gm22238-201ENSMUST00000175222 88 ntBASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Gm5812-201ENSMUST00000061073 957 ntBASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 BC021767-201ENSMUST00000126387 1716 ntBASIC15.97■□□□□ 0.15
Trbv29A0A0G2LB96 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv29A0A0G2LB96 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv29A0A0G2LB96 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv29A0A0G2LB96 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Trbv29A0A0G2LB96 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv29A0A0G2LB96 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Gm15546-201ENSMUST00000122095 826 ntBASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv29A0A0G2LB96 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms