Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Gm10493-201ENSMUST00000097270 612 ntBASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-1A0A0G2JEU8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.87□□□□□ -0.19
Trav13n-1A0A0G2JEU8 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms