Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm18284-201ENSMUST00000172604 624 ntBASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm26833-201ENSMUST00000180899 440 ntBASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm8495-201ENSMUST00000188740 694 ntBASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms